WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F1.1b.1 Sequence Name  F08F1.1b.1
Length (nt)  1830   Chromosome Location  X: 8432663-8437350
Chromosome . Primary Identifier  X Chromosome Location . Start  8432663
Chromosome Location . End  8437350 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F1.1b F08F1.1b 1668   X: 8432694-8432807

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1b.1 8432663 8437350 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242185   145   X: 8432663-8432807 Caenorhabditis elegans
Exon242186   141   X: 8433013-8433153 Caenorhabditis elegans
Exon242188   186   X: 8433291-8433476 Caenorhabditis elegans
Exon242193   248   X: 8434910-8435157 Caenorhabditis elegans
Exon242196   223   X: 8435636-8435858 Caenorhabditis elegans
Exon242199   156   X: 8435909-8436064 Caenorhabditis elegans
Exon242202   75   X: 8436112-8436186 Caenorhabditis elegans
Exon242205   209   X: 8436232-8436440 Caenorhabditis elegans
Exon242208   138   X: 8436489-8436626 Caenorhabditis elegans
Exon242214   309   X: 8437042-8437350 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1b.1 8432663 8437350 1

1 Sequence

Length
1830

1 Sequence Ontology Term

Identifier Name Description
transcript