WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.12f.1 Sequence Name  Y95B8A.12f.1
Length (nt)  2011   Chromosome Location  I: 912332-926916
Chromosome . Primary Identifier  I Chromosome Location . Start  912332
Chromosome Location . End  926916 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.12f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022391 prhg-1 Y95B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.12f Y95B8A.12f 1863   I: 912441-912573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12f.1 912332 926916 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1777   242   I: 912332-912573 Caenorhabditis elegans
Exon1788   202   I: 912625-912826 Caenorhabditis elegans
Exon1794   109   I: 914002-914110 Caenorhabditis elegans
Exon1800   186   I: 914164-914349 Caenorhabditis elegans
Exon1806   411   I: 914408-914818 Caenorhabditis elegans
Exon1812   100   I: 915980-916079 Caenorhabditis elegans
Exon1819   236   I: 916171-916406 Caenorhabditis elegans
Exon1825   203   I: 917211-917413 Caenorhabditis elegans
Exon1834   217   I: 918779-918995 Caenorhabditis elegans
Exon1840   105   I: 926812-926916 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12f.1 912332 926916 -1

1 Sequence

Length
2011

1 Sequence Ontology Term

Identifier Name Description
transcript