WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F1.1a.1 Sequence Name  F08F1.1a.1
Length (nt)  1384   Chromosome Location  X: 8434758-8437346
Chromosome . Primary Identifier  X Chromosome Location . Start  8434758
Chromosome Location . End  8437346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F1.1a F08F1.1a 1257   X: 8434758-8434787

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1a.1 8434758 8437346 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242169   30   X: 8434758-8434787 Caenorhabditis elegans
Exon242170   248   X: 8434910-8435157 Caenorhabditis elegans
Exon242173   223   X: 8435636-8435858 Caenorhabditis elegans
Exon242176   156   X: 8435909-8436064 Caenorhabditis elegans
Exon242179   75   X: 8436112-8436186 Caenorhabditis elegans
Exon242182   209   X: 8436232-8436440 Caenorhabditis elegans
Exon242185   138   X: 8436489-8436626 Caenorhabditis elegans
Exon242191   305   X: 8437042-8437346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1a.1 8434758 8437346 1

1 Sequence

Length
1384

1 Sequence Ontology Term

Identifier Name Description
transcript