WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.12a.1 Sequence Name  Y95B8A.12a.1
Length (nt)  1985   Chromosome Location  I: 912332-919147
Chromosome . Primary Identifier  I Chromosome Location . Start  912332
Chromosome Location . End  919147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022391 prhg-1 Y95B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.12a Y95B8A.12a 1866   I: 912441-912573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12a.1 912332 919147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1778   242   I: 912332-912573 Caenorhabditis elegans
Exon1783   202   I: 912625-912826 Caenorhabditis elegans
Exon1789   109   I: 914002-914110 Caenorhabditis elegans
Exon1795   186   I: 914164-914349 Caenorhabditis elegans
Exon1801   411   I: 914408-914818 Caenorhabditis elegans
Exon1807   100   I: 915980-916079 Caenorhabditis elegans
Exon1814   236   I: 916171-916406 Caenorhabditis elegans
Exon1820   203   I: 917211-917413 Caenorhabditis elegans
Exon1826   24   I: 917914-917937 Caenorhabditis elegans
Exon1829   217   I: 918779-918995 Caenorhabditis elegans
Exon1835   55   I: 919093-919147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12a.1 912332 919147 -1

1 Sequence

Length
1985

1 Sequence Ontology Term

Identifier Name Description
transcript