WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.12c.1 Sequence Name  Y95B8A.12c.1
Length (nt)  2017   Chromosome Location  I: 912349-926915
Chromosome . Primary Identifier  I Chromosome Location . Start  912349
Chromosome Location . End  926915 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022391 prhg-1 Y95B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.12c Y95B8A.12c 1887   I: 912441-912573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12c.1 912349 926915 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1781   225   I: 912349-912573 Caenorhabditis elegans
Exon1785   202   I: 912625-912826 Caenorhabditis elegans
Exon1791   109   I: 914002-914110 Caenorhabditis elegans
Exon1797   186   I: 914164-914349 Caenorhabditis elegans
Exon1803   411   I: 914408-914818 Caenorhabditis elegans
Exon1809   100   I: 915980-916079 Caenorhabditis elegans
Exon1816   236   I: 916171-916406 Caenorhabditis elegans
Exon1822   203   I: 917211-917413 Caenorhabditis elegans
Exon1827   24   I: 917914-917937 Caenorhabditis elegans
Exon1831   217   I: 918779-918995 Caenorhabditis elegans
Exon1839   104   I: 926812-926915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12c.1 912349 926915 -1

1 Sequence

Length
2017

1 Sequence Ontology Term

Identifier Name Description
transcript