WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.12d.1 Sequence Name  Y95B8A.12d.1
Length (nt)  1869   Chromosome Location  I: 912441-926562
Chromosome . Primary Identifier  I Chromosome Location . Start  912441
Chromosome Location . End  926562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.12d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022391 prhg-1 Y95B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.12d Y95B8A.12d 1869   I: 912441-912573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12d.1 912441 926562 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1782   133   I: 912441-912573 Caenorhabditis elegans
Exon1786   202   I: 912625-912826 Caenorhabditis elegans
Exon1792   109   I: 914002-914110 Caenorhabditis elegans
Exon1798   186   I: 914164-914349 Caenorhabditis elegans
Exon1804   411   I: 914408-914818 Caenorhabditis elegans
Exon1810   100   I: 915980-916079 Caenorhabditis elegans
Exon1817   236   I: 916171-916406 Caenorhabditis elegans
Exon1823   203   I: 917211-917413 Caenorhabditis elegans
Exon1828   24   I: 917914-917937 Caenorhabditis elegans
Exon1832   217   I: 918779-918995 Caenorhabditis elegans
Exon1837   48   I: 926515-926562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12d.1 912441 926562 -1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
transcript