WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16F9.2.1 Sequence Name  F16F9.2.1
Length (nt)  4041   Chromosome Location  X: 8450381-8455640
Chromosome . Primary Identifier  X Chromosome Location . Start  8450381
Chromosome Location . End  8455640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16F9.2 F16F9.2 3765   X: 8450657-8450809

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16F9.2.1 8450381 8455640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242208   429   X: 8450381-8450809 Caenorhabditis elegans
Exon242209   475   X: 8451343-8451817 Caenorhabditis elegans
Exon242210   151   X: 8451877-8452027 Caenorhabditis elegans
Exon242211   1557   X: 8452079-8453635 Caenorhabditis elegans
Exon242212   279   X: 8453892-8454170 Caenorhabditis elegans
Exon242213   69   X: 8454275-8454343 Caenorhabditis elegans
Exon242214   978   X: 8454517-8455494 Caenorhabditis elegans
Exon242215   103   X: 8455538-8455640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16F9.2.1 8450381 8455640 -1

1 Sequence

Length
4041

1 Sequence Ontology Term

Identifier Name Description
transcript