WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16F9.3.1 Sequence Name  F16F9.3.1
Length (nt)  780   Chromosome Location  X: 8457614-8459848
Chromosome . Primary Identifier  X Chromosome Location . Start  8457614
Chromosome Location . End  8459848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017514 F16F9.3 F16F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16F9.3 F16F9.3 543   X: 8457727-8457790

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16F9.3.1 8457614 8459848 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242221   177   X: 8457614-8457790 Caenorhabditis elegans
Exon242222   126   X: 8457845-8457970 Caenorhabditis elegans
Exon242223   65   X: 8458014-8458078 Caenorhabditis elegans
Exon242224   148   X: 8458127-8458274 Caenorhabditis elegans
Exon242226   264   X: 8459585-8459848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16F9.3.1 8457614 8459848 1

1 Sequence

Length
780

1 Sequence Ontology Term

Identifier Name Description
transcript