WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16F9.5.1 Sequence Name  F16F9.5.1
Length (nt)  2495   Chromosome Location  X: 8465760-8470314
Chromosome . Primary Identifier  X Chromosome Location . Start  8465760
Chromosome Location . End  8470314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003174 mec-10 F16F9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16F9.5 F16F9.5 2175   X: 8466006-8466179

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242257   420   X: 8465760-8466179 Caenorhabditis elegans
Exon242258   76   X: 8466268-8466343 Caenorhabditis elegans
Exon242259   129   X: 8466391-8466519 Caenorhabditis elegans
Exon242260   176   X: 8466737-8466912 Caenorhabditis elegans
Exon242261   96   X: 8467070-8467165 Caenorhabditis elegans
Exon242262   161   X: 8467227-8467387 Caenorhabditis elegans
Exon242263   101   X: 8467653-8467753 Caenorhabditis elegans
Exon242264   75   X: 8467797-8467871 Caenorhabditis elegans
Exon242265   83   X: 8467922-8468004 Caenorhabditis elegans
Exon242266   93   X: 8468054-8468146 Caenorhabditis elegans
Exon242267   77   X: 8468422-8468498 Caenorhabditis elegans
Exon242268   70   X: 8468656-8468725 Caenorhabditis elegans
Exon242269   297   X: 8468829-8469125 Caenorhabditis elegans
Exon242270   83   X: 8469176-8469258 Caenorhabditis elegans
Exon242271   122   X: 8469464-8469585 Caenorhabditis elegans
Exon242272   93   X: 8469832-8469924 Caenorhabditis elegans
Exon242273   343   X: 8469972-8470314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

1 Sequence

Length
2495

1 Sequence Ontology Term

Identifier Name Description
transcript