WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16F9.5.1 Sequence Name  F16F9.5.1
Length (nt)  2495   Chromosome Location  X: 8465760-8470314
Chromosome . Primary Identifier  X Chromosome Location . Start  8465760
Chromosome Location . End  8470314 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003174 mec-10 F16F9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16F9.5 F16F9.5 2175   X: 8466006-8466179

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242235   420   X: 8465760-8466179 Caenorhabditis elegans
Exon242236   76   X: 8466268-8466343 Caenorhabditis elegans
Exon242237   129   X: 8466391-8466519 Caenorhabditis elegans
Exon242238   176   X: 8466737-8466912 Caenorhabditis elegans
Exon242239   96   X: 8467070-8467165 Caenorhabditis elegans
Exon242240   161   X: 8467227-8467387 Caenorhabditis elegans
Exon242241   101   X: 8467653-8467753 Caenorhabditis elegans
Exon242242   75   X: 8467797-8467871 Caenorhabditis elegans
Exon242243   83   X: 8467922-8468004 Caenorhabditis elegans
Exon242244   93   X: 8468054-8468146 Caenorhabditis elegans
Exon242245   77   X: 8468422-8468498 Caenorhabditis elegans
Exon242246   70   X: 8468656-8468725 Caenorhabditis elegans
Exon242247   297   X: 8468829-8469125 Caenorhabditis elegans
Exon242248   83   X: 8469176-8469258 Caenorhabditis elegans
Exon242249   122   X: 8469464-8469585 Caenorhabditis elegans
Exon242250   93   X: 8469832-8469924 Caenorhabditis elegans
Exon242251   343   X: 8469972-8470314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

1 Sequence

Length
2495

1 Sequence Ontology Term

Identifier Name Description
transcript