WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B10.4a.1 Sequence Name  T01B10.4a.1
Length (nt)  1567   Chromosome Location  X: 8473998-8476176
Chromosome . Primary Identifier  X Chromosome Location . Start  8473998
Chromosome Location . End  8476176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003613 nhr-14 T01B10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B10.4a T01B10.4a 1308   X: 8474257-8474307

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B10.4a.1 8473998 8476176 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242275   310   X: 8473998-8474307 Caenorhabditis elegans
Exon242276   196   X: 8474362-8474557 Caenorhabditis elegans
Exon242278   488   X: 8474608-8475095 Caenorhabditis elegans
Exon242280   201   X: 8475481-8475681 Caenorhabditis elegans
Exon242282   232   X: 8475736-8475967 Caenorhabditis elegans
Exon242284   140   X: 8476037-8476176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B10.4a.1 8473998 8476176 -1

1 Sequence

Length
1567

1 Sequence Ontology Term

Identifier Name Description
transcript