WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2021.4a.2 Sequence Name  D2021.4a.2
Length (nt)  994   Chromosome Location  X: 8546445-8549049
Chromosome . Primary Identifier  X Chromosome Location . Start  8546445
Chromosome Location . End  8549049 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2021.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017048 D2021.4 D2021.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2021.4a D2021.4a 885   X: 8546498-8546662

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2021.4a.2 8546445 8549049 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242367   218   X: 8546445-8546662 Caenorhabditis elegans
Exon242372   158   X: 8546800-8546957 Caenorhabditis elegans
Exon242376   235   X: 8547597-8547831 Caenorhabditis elegans
Exon242379   104   X: 8547873-8547976 Caenorhabditis elegans
Exon242381   155   X: 8548022-8548176 Caenorhabditis elegans
Exon242384   102   X: 8548907-8549008 Caenorhabditis elegans
Exon242388   22   X: 8549028-8549049 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2021.4a.2 8546445 8549049 -1

1 Sequence

Length
994

1 Sequence Ontology Term

Identifier Name Description
transcript