WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34D9A.3f.1 Sequence Name  Y34D9A.3f.1
Length (nt)  2418   Chromosome Location  I: 1034545-1040861
Chromosome . Primary Identifier  I Chromosome Location . Start  1034545
Chromosome Location . End  1040861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34D9A.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021329 Y34D9A.3 Y34D9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34D9A.3f Y34D9A.3f 2124   I: 1034787-1034879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34D9A.3f.1 1034545 1040861 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2013   100   I: 1034545-1034644 Caenorhabditis elegans
Exon2018   189   I: 1034691-1034879 Caenorhabditis elegans
Exon2023   132   I: 1034932-1035063 Caenorhabditis elegans
Exon2027   124   I: 1035121-1035244 Caenorhabditis elegans
Exon2031   93   I: 1035304-1035396 Caenorhabditis elegans
Exon2035   140   I: 1037312-1037451 Caenorhabditis elegans
Exon2039   208   I: 1037506-1037713 Caenorhabditis elegans
Exon2043   120   I: 1039053-1039172 Caenorhabditis elegans
Exon2047   71   I: 1039224-1039294 Caenorhabditis elegans
Exon2051   544   I: 1039338-1039881 Caenorhabditis elegans
Exon2057   533   I: 1040114-1040646 Caenorhabditis elegans
Exon2062   164   I: 1040698-1040861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34D9A.3f.1 1034545 1040861 1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
transcript