WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2021.1b.1 Sequence Name  D2021.1b.1
Length (nt)  3825   Chromosome Location  X: 8557146-8563238
Chromosome . Primary Identifier  X Chromosome Location . Start  8557146
Chromosome Location . End  8563238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2021.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017046 utx-1 D2021.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2021.1b D2021.1b 3426   X: 8557180-8557245

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2021.1b.1 8557146 8563238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242406   100   X: 8557146-8557245 Caenorhabditis elegans
Exon242409   77   X: 8557298-8557374 Caenorhabditis elegans
Exon242411   327   X: 8557428-8557754 Caenorhabditis elegans
Exon242413   121   X: 8557804-8557924 Caenorhabditis elegans
Exon242415   141   X: 8558257-8558397 Caenorhabditis elegans
Exon242416   258   X: 8558452-8558709 Caenorhabditis elegans
Exon242419   120   X: 8558841-8558960 Caenorhabditis elegans
Exon242421   133   X: 8559105-8559237 Caenorhabditis elegans
Exon242423   185   X: 8559929-8560113 Caenorhabditis elegans
Exon242425   225   X: 8560161-8560385 Caenorhabditis elegans
Exon242427   873   X: 8560814-8561686 Caenorhabditis elegans
Exon242429   590   X: 8561742-8562331 Caenorhabditis elegans
Exon242431   189   X: 8562380-8562568 Caenorhabditis elegans
Exon242433   486   X: 8562753-8563238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2021.1b.1 8557146 8563238 1

1 Sequence

Length
3825

1 Sequence Ontology Term

Identifier Name Description
transcript