WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2021.1a Sequence Name  D2021.1a
Length (nt)  3441   Chromosome Location  X: 8557180-8557245
Chromosome . Primary Identifier  X Chromosome Location . Start  8557180
Chromosome Location . End  8557245
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2021.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51475 UTX-1, isoform a 131.7 1146 Caenorhabditis elegans
 

Other

39 RNAi

WormBase ID
WBRNAi00001813
WBRNAi00043447
WBRNAi00024947
WBRNAi00027246
WBRNAi00089501
WBRNAi00012567
WBRNAi00087825
WBRNAi00087831
WBRNAi00082955
WBRNAi00082957
WBRNAi00082956
WBRNAi00082959
WBRNAi00082958
WBRNAi00082961
WBRNAi00082960
WBRNAi00082962
WBRNAi00082954
WBRNAi00089508
WBRNAi00089512
WBRNAi00089513
WBRNAi00090747
WBRNAi00091500
WBRNAi00091536
WBRNAi00091541
WBRNAi00007971
WBRNAi00108688
WBRNAi00108699
WBRNAi00108613
WBRNAi00089499
WBRNAi00064326

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2021.1a 8557180 8557245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017046 utx-1 D2021.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2021.1a 8557180 8557245 1
CDS:D2021.1a 8557298 8557374 1
CDS:D2021.1a 8557428 8557754 1
CDS:D2021.1a 8557804 8557924 1
CDS:D2021.1a 8558257 8558397 1
CDS:D2021.1a 8558452 8558724 1
CDS:D2021.1a 8558841 8558960 1
CDS:D2021.1a 8559105 8559237 1
CDS:D2021.1a 8559929 8560113 1
CDS:D2021.1a 8560161 8560385 1
CDS:D2021.1a 8560814 8561686 1
CDS:D2021.1a 8561742 8562331 1
CDS:D2021.1a 8562380 8562568 1
CDS:D2021.1a 8562753 8562873 1

1 Sequence

Length
3441

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2021.1a.1 D2021.1a.1 3832   X: 8557151-8563235