WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2021.1a.1 Sequence Name  D2021.1a.1
Length (nt)  3832   Chromosome Location  X: 8557151-8563235
Chromosome . Primary Identifier  X Chromosome Location . Start  8557151
Chromosome Location . End  8563235 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2021.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017046 utx-1 D2021.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2021.1a D2021.1a 3441   X: 8557180-8557245

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2021.1a.1 8557151 8563235 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242407   95   X: 8557151-8557245 Caenorhabditis elegans
Exon242408   77   X: 8557298-8557374 Caenorhabditis elegans
Exon242410   327   X: 8557428-8557754 Caenorhabditis elegans
Exon242412   121   X: 8557804-8557924 Caenorhabditis elegans
Exon242414   141   X: 8558257-8558397 Caenorhabditis elegans
Exon242417   273   X: 8558452-8558724 Caenorhabditis elegans
Exon242418   120   X: 8558841-8558960 Caenorhabditis elegans
Exon242420   133   X: 8559105-8559237 Caenorhabditis elegans
Exon242422   185   X: 8559929-8560113 Caenorhabditis elegans
Exon242424   225   X: 8560161-8560385 Caenorhabditis elegans
Exon242426   873   X: 8560814-8561686 Caenorhabditis elegans
Exon242428   590   X: 8561742-8562331 Caenorhabditis elegans
Exon242430   189   X: 8562380-8562568 Caenorhabditis elegans
Exon242432   483   X: 8562753-8563235 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2021.1a.1 8557151 8563235 1

1 Sequence

Length
3832

1 Sequence Ontology Term

Identifier Name Description
transcript