WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18E9.5a.2 Sequence Name  F18E9.5a.2
Length (nt)  3575   Chromosome Location  X: 8571047-8575451
Chromosome . Primary Identifier  X Chromosome Location . Start  8571047
Chromosome Location . End  8575451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18E9.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017571 jmjd-3.1 F18E9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18E9.5a F18E9.5a 3063   X: 8571469-8571958

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5a.2 8571047 8575451 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242435   76   X: 8571047-8571122 Caenorhabditis elegans
Exon242440   511   X: 8571448-8571958 Caenorhabditis elegans
Exon242442   171   X: 8572099-8572269 Caenorhabditis elegans
Exon242446   395   X: 8572323-8572717 Caenorhabditis elegans
Exon242450   231   X: 8572765-8572995 Caenorhabditis elegans
Exon242454   712   X: 8573047-8573758 Caenorhabditis elegans
Exon242458   176   X: 8573805-8573980 Caenorhabditis elegans
Exon242462   593   X: 8574038-8574630 Caenorhabditis elegans
Exon242466   201   X: 8574691-8574891 Caenorhabditis elegans
Exon242471   509   X: 8574943-8575451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5a.2 8571047 8575451 1

1 Sequence

Length
3575

1 Sequence Ontology Term

Identifier Name Description
transcript