WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18E9.5b.1 Sequence Name  F18E9.5b.1
Length (nt)  3211   Chromosome Location  X: 8571049-8575036
Chromosome . Primary Identifier  X Chromosome Location . Start  8571049
Chromosome Location . End  8575036 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18E9.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017571 jmjd-3.1 F18E9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18E9.5b F18E9.5b 3186   X: 8571074-8571122

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5b.1 8571049 8575036 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242436   74   X: 8571049-8571122 Caenorhabditis elegans
Exon242439   564   X: 8571395-8571958 Caenorhabditis elegans
Exon242444   171   X: 8572099-8572269 Caenorhabditis elegans
Exon242448   395   X: 8572323-8572717 Caenorhabditis elegans
Exon242452   231   X: 8572765-8572995 Caenorhabditis elegans
Exon242456   712   X: 8573047-8573758 Caenorhabditis elegans
Exon242460   176   X: 8573805-8573980 Caenorhabditis elegans
Exon242464   593   X: 8574038-8574630 Caenorhabditis elegans
Exon242468   201   X: 8574691-8574891 Caenorhabditis elegans
Exon242469   94   X: 8574943-8575036 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5b.1 8571049 8575036 1

1 Sequence

Length
3211

1 Sequence Ontology Term

Identifier Name Description
transcript