WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18E9.5a.1 Sequence Name  F18E9.5a.1
Length (nt)  3626   Chromosome Location  X: 8571049-8575451
Chromosome . Primary Identifier  X Chromosome Location . Start  8571049
Chromosome Location . End  8575451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18E9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017571 jmjd-3.1 F18E9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18E9.5a F18E9.5a 3063   X: 8571469-8571958

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5a.1 8571049 8575451 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242437   74   X: 8571049-8571122 Caenorhabditis elegans
Exon242438   564   X: 8571395-8571958 Caenorhabditis elegans
Exon242441   171   X: 8572099-8572269 Caenorhabditis elegans
Exon242445   395   X: 8572323-8572717 Caenorhabditis elegans
Exon242449   231   X: 8572765-8572995 Caenorhabditis elegans
Exon242453   712   X: 8573047-8573758 Caenorhabditis elegans
Exon242457   176   X: 8573805-8573980 Caenorhabditis elegans
Exon242461   593   X: 8574038-8574630 Caenorhabditis elegans
Exon242465   201   X: 8574691-8574891 Caenorhabditis elegans
Exon242470   509   X: 8574943-8575451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18E9.5a.1 8571049 8575451 1

1 Sequence

Length
3626

1 Sequence Ontology Term

Identifier Name Description
transcript