WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.10b.1 Sequence Name  Y48G8AL.10b.1
Length (nt)  2649   Chromosome Location  I: 1136515-1152137
Chromosome . Primary Identifier  I Chromosome Location . Start  1136515
Chromosome Location . End  1152137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021689 znf-236 Y48G8AL.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.10b Y48G8AL.10b 2649   I: 1136515-1136742

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.10b.1 1136515 1152137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2162   228   I: 1136515-1136742 Caenorhabditis elegans
Exon2165   330   I: 1137812-1138141 Caenorhabditis elegans
Exon2169   111   I: 1140158-1140268 Caenorhabditis elegans
Exon2173   229   I: 1140803-1141031 Caenorhabditis elegans
Exon2177   214   I: 1142085-1142298 Caenorhabditis elegans
Exon2181   191   I: 1143349-1143539 Caenorhabditis elegans
Exon2185   141   I: 1145715-1145855 Caenorhabditis elegans
Exon2190   499   I: 1147087-1147585 Caenorhabditis elegans
Exon2194   691   I: 1149906-1150596 Caenorhabditis elegans
Exon2195   15   I: 1152123-1152137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.10b.1 1136515 1152137 -1

1 Sequence

Length
2649

1 Sequence Ontology Term

Identifier Name Description
transcript