WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A12.3.1 Sequence Name  K01A12.3.1
Length (nt)  1491   Chromosome Location  X: 8620570-8625190
Chromosome . Primary Identifier  X Chromosome Location . Start  8620570
Chromosome Location . End  8625190 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019287 K01A12.3 K01A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A12.3 K01A12.3 1491   X: 8620570-8620713

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A12.3.1 8620570 8625190 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242548   144   X: 8620570-8620713 Caenorhabditis elegans
Exon242549   108   X: 8621276-8621383 Caenorhabditis elegans
Exon242550   100   X: 8621437-8621536 Caenorhabditis elegans
Exon242551   167   X: 8621613-8621779 Caenorhabditis elegans
Exon242552   323   X: 8621835-8622157 Caenorhabditis elegans
Exon242553   220   X: 8622204-8622423 Caenorhabditis elegans
Exon242554   120   X: 8623166-8623285 Caenorhabditis elegans
Exon242555   89   X: 8623376-8623464 Caenorhabditis elegans
Exon242563   126   X: 8624740-8624865 Caenorhabditis elegans
Exon242564   94   X: 8625097-8625190 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A12.3.1 8620570 8625190 -1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
transcript