WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E2.4a.2 Sequence Name  K09E2.4a.2
Length (nt)  3737   Chromosome Location  X: 8661276-8671822
Chromosome . Primary Identifier  X Chromosome Location . Start  8661276
Chromosome Location . End  8671822 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E2.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004369 rig-1 K09E2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E2.4a K09E2.4a 3252   X: 8661294-8661369

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K09E2.4a.2 8661276 8671822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242599   94   X: 8661276-8661369 Caenorhabditis elegans
Exon242603   187   X: 8661434-8661620 Caenorhabditis elegans
Exon242606   172   X: 8661675-8661846 Caenorhabditis elegans
Exon242609   130   X: 8662926-8663055 Caenorhabditis elegans
Exon242612   140   X: 8663102-8663241 Caenorhabditis elegans
Exon242615   426   X: 8663674-8664099 Caenorhabditis elegans
Exon242619   171   X: 8664287-8664457 Caenorhabditis elegans
Exon242622   205   X: 8664506-8664710 Caenorhabditis elegans
Exon242626   337   X: 8664762-8665098 Caenorhabditis elegans
Exon242630   223   X: 8665144-8665366 Caenorhabditis elegans
Exon242633   138   X: 8665412-8665549 Caenorhabditis elegans
Exon242638   136   X: 8666073-8666208 Caenorhabditis elegans
Exon242646   174   X: 8669291-8669464 Caenorhabditis elegans
Exon242653   128   X: 8670084-8670211 Caenorhabditis elegans
Exon242661   288   X: 8670324-8670611 Caenorhabditis elegans
Exon242669   152   X: 8670914-8671065 Caenorhabditis elegans
Exon242682   636   X: 8671187-8671822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K09E2.4a.2 8661276 8671822 1

1 Sequence

Length
3737

1 Sequence Ontology Term

Identifier Name Description
transcript