WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E2.1.1 Sequence Name  K09E2.1.1
Length (nt)  2865   Chromosome Location  X: 8681900-8686277
Chromosome . Primary Identifier  X Chromosome Location . Start  8681900
Chromosome Location . End  8686277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019570 K09E2.1 K09E2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E2.1 K09E2.1 2724   X: 8681910-8681988

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09E2.1.1 8681900 8686277 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242724   89   X: 8681900-8681988 Caenorhabditis elegans
Exon242725   148   X: 8682217-8682364 Caenorhabditis elegans
Exon242726   168   X: 8682411-8682578 Caenorhabditis elegans
Exon242727   89   X: 8682791-8682879 Caenorhabditis elegans
Exon242728   88   X: 8682936-8683023 Caenorhabditis elegans
Exon242729   76   X: 8683157-8683232 Caenorhabditis elegans
Exon242730   1190   X: 8683279-8684468 Caenorhabditis elegans
Exon242731   109   X: 8684686-8684794 Caenorhabditis elegans
Exon242732   220   X: 8684897-8685116 Caenorhabditis elegans
Exon242733   83   X: 8685168-8685250 Caenorhabditis elegans
Exon242734   166   X: 8685296-8685461 Caenorhabditis elegans
Exon242735   97   X: 8685518-8685614 Caenorhabditis elegans
Exon242736   96   X: 8685874-8685969 Caenorhabditis elegans
Exon242737   246   X: 8686032-8686277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09E2.1.1 8681900 8686277 1

1 Sequence

Length
2865

1 Sequence Ontology Term

Identifier Name Description
transcript