WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A9.3.1 Sequence Name  F53A9.3.1
Length (nt)  545   Chromosome Location  X: 8708353-8709404
Chromosome . Primary Identifier  X Chromosome Location . Start  8708353
Chromosome Location . End  8709404 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018726 F53A9.3 F53A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A9.3 F53A9.3 459   X: 8708365-8708451

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53A9.3.1 8708353 8709404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242757   99   X: 8708353-8708451 Caenorhabditis elegans
Exon242758   120   X: 8708496-8708615 Caenorhabditis elegans
Exon242759   96   X: 8708986-8709081 Caenorhabditis elegans
Exon242760   81   X: 8709128-8709208 Caenorhabditis elegans
Exon242761   149   X: 8709256-8709404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53A9.3.1 8708353 8709404 1

1 Sequence

Length
545

1 Sequence Ontology Term

Identifier Name Description
transcript