WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04E5.8b Sequence Name  R04E5.8b
Length (nt)  429   Chromosome Location  X: 8802659-8802948
Chromosome . Primary Identifier  X Chromosome Location . Start  8802659
Chromosome Location . End  8802948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04E5.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33934 R04E5.8, isoform b 17.0 142 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00002313
WBRNAi00017412

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04E5.8b 8802659 8802948 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019871 R04E5.8 R04E5.8 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04E5.8b 8802659 8802948 -1
CDS:R04E5.8b 8803007 8803145 -1

1 Sequence

Length
429

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04E5.8b.1 R04E5.8b.1 4038   X: 8801594-8806117
Transcript:R04E5.8b.3 R04E5.8b.3 1681   X: 8801606-8803515
Transcript:R04E5.8b.2 R04E5.8b.2 3828   X: 8801660-8806108