WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04E5.9.1 Sequence Name  R04E5.9.1
Length (nt)  879   Chromosome Location  X: 8806658-8811142
Chromosome . Primary Identifier  X Chromosome Location . Start  8806658
Chromosome Location . End  8811142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04E5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019872 R04E5.9 R04E5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04E5.9 R04E5.9 519   X: 8806869-8806872

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04E5.9.1 8806658 8811142 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242906   215   X: 8806658-8806872 Caenorhabditis elegans
Exon242907   120   X: 8806921-8807040 Caenorhabditis elegans
Exon242908   78   X: 8807093-8807170 Caenorhabditis elegans
Exon242909   216   X: 8810573-8810788 Caenorhabditis elegans
Exon242910   96   X: 8810837-8810932 Caenorhabditis elegans
Exon242911   154   X: 8810989-8811142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04E5.9.1 8806658 8811142 -1

1 Sequence

Length
879

1 Sequence Ontology Term

Identifier Name Description
transcript