WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28G1.6.1 Sequence Name  C28G1.6.1
Length (nt)  1504   Chromosome Location  X: 8829448-8831262
Chromosome . Primary Identifier  X Chromosome Location . Start  8829448
Chromosome Location . End  8831262 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28G1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016191 C28G1.6 C28G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28G1.6 C28G1.6 888   X: 8829996-8830054

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28G1.6.1 8829448 8831262 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242977   607   X: 8829448-8830054 Caenorhabditis elegans
Exon242978   274   X: 8830104-8830377 Caenorhabditis elegans
Exon242979   55   X: 8830427-8830481 Caenorhabditis elegans
Exon242980   188   X: 8830532-8830719 Caenorhabditis elegans
Exon242981   66   X: 8830791-8830856 Caenorhabditis elegans
Exon242982   176   X: 8830903-8831078 Caenorhabditis elegans
Exon242984   138   X: 8831125-8831262 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28G1.6.1 8829448 8831262 -1

1 Sequence

Length
1504

1 Sequence Ontology Term

Identifier Name Description
transcript