WormMine: Gene WBGene00200580

• WormBase Gene ID: WBGene00200580
• Gene Name: C28G1.7
• Sequence Name: C28G1.7
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by daf-2 and ogt-1 based on microarray and RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 79

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00200580

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C28G1.7	C28G1.7	79	X: 8846504-8846582

Other

0 CDSs

0 RNAi Result

8 Allele

• gk964260
• gk962707
• gk963732
• gk964126
• gk964113
• gk961681
• gk288310
• gk288309

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00200580
• Start: 8846504
• End: 8846582
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_8846583..8846720
• Length (nt): 138
• Chromosome Location: X: 8846583-8846720
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_upregulated
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00200580
• Start: 8846504
• End: 8846582
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 79

1 Sequence Ontology Term