WormMine: Gene WBGene00022949

• WormBase Gene ID: WBGene00022949
• Gene Name: C28G1.t3
• Sequence Name: C28G1.t3
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by clk-1 and daf-2 based on microarray studies.
• Biotype: SO:0001272
• Genetic Position: :±
• Length (nt): 73

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00022949

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C28G1.t3	C28G1.t3	73	X: 8846505-8846577

Other

0 CDSs

1 RNAi Result

• WBRNAi00082816

8 Allele

• gk964260
• gk962707
• gk963732
• gk964126
• gk964113
• gk961681
• gk288310
• gk288309

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00022949
• Start: 8846505
• End: 8846577
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_oocyte_depleted
	Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_upregulated
	Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2.	Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off.	WBPaper00045774:clk-1_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00022949
• Start: 8846505
• End: 8846577
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 73

1 Sequence Ontology Term