WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13E3.1b.1 Sequence Name  C13E3.1b.1
Length (nt)  2640   Chromosome Location  X: 8893157-8898331
Chromosome . Primary Identifier  X Chromosome Location . Start  8893157
Chromosome Location . End  8898331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13E3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015740 C13E3.1 C13E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13E3.1b C13E3.1b 2640   X: 8893157-8893351

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13E3.1b.1 8893157 8898331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243063   195   X: 8893157-8893351 Caenorhabditis elegans
Exon243065   99   X: 8893452-8893550 Caenorhabditis elegans
Exon243067   92   X: 8893940-8894031 Caenorhabditis elegans
Exon243069   212   X: 8894079-8894290 Caenorhabditis elegans
Exon243071   1085   X: 8894472-8895556 Caenorhabditis elegans
Exon243073   165   X: 8895601-8895765 Caenorhabditis elegans
Exon243075   198   X: 8896305-8896502 Caenorhabditis elegans
Exon243077   261   X: 8896550-8896810 Caenorhabditis elegans
Exon243080   147   X: 8897953-8898099 Caenorhabditis elegans
Exon243081   186   X: 8898146-8898331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13E3.1b.1 8893157 8898331 1

1 Sequence

Length
2640

1 Sequence Ontology Term

Identifier Name Description
transcript