WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1009.1a.1 Sequence Name  D1009.1a.1
Length (nt)  2453   Chromosome Location  X: 8931179-8939263
Chromosome . Primary Identifier  X Chromosome Location . Start  8931179
Chromosome Location . End  8939263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1009.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017012 acs-22 D1009.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1009.1a D1009.1a 1968   X: 8931319-8931323

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1a.1 8931179 8939263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243125   145   X: 8931179-8931323 Caenorhabditis elegans
Exon243126   174   X: 8934557-8934730 Caenorhabditis elegans
Exon243128   88   X: 8935335-8935422 Caenorhabditis elegans
Exon243130   108   X: 8935553-8935660 Caenorhabditis elegans
Exon243132   199   X: 8936623-8936821 Caenorhabditis elegans
Exon243135   457   X: 8936904-8937360 Caenorhabditis elegans
Exon243138   164   X: 8937405-8937568 Caenorhabditis elegans
Exon243141   446   X: 8937956-8938401 Caenorhabditis elegans
Exon243144   66   X: 8938488-8938553 Caenorhabditis elegans
Exon243147   97   X: 8938608-8938704 Caenorhabditis elegans
Exon243151   509   X: 8938755-8939263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1a.1 8931179 8939263 1

1 Sequence

Length
2453

1 Sequence Ontology Term

Identifier Name Description
transcript