WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1009.1c.1 Sequence Name  D1009.1c.1
Length (nt)  2308   Chromosome Location  X: 8934557-8939263
Chromosome . Primary Identifier  X Chromosome Location . Start  8934557
Chromosome Location . End  8939263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1009.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017012 acs-22 D1009.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1009.1c D1009.1c 1959   X: 8934561-8934730

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1c.1 8934557 8939263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243127   174   X: 8934557-8934730 Caenorhabditis elegans
Exon243129   88   X: 8935335-8935422 Caenorhabditis elegans
Exon243131   108   X: 8935553-8935660 Caenorhabditis elegans
Exon243133   199   X: 8936623-8936821 Caenorhabditis elegans
Exon243136   457   X: 8936904-8937360 Caenorhabditis elegans
Exon243139   164   X: 8937405-8937568 Caenorhabditis elegans
Exon243142   446   X: 8937956-8938401 Caenorhabditis elegans
Exon243145   66   X: 8938488-8938553 Caenorhabditis elegans
Exon243148   97   X: 8938608-8938704 Caenorhabditis elegans
Exon243152   509   X: 8938755-8939263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1c.1 8934557 8939263 1

1 Sequence

Length
2308

1 Sequence Ontology Term

Identifier Name Description
transcript