WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1009.1d.1 Sequence Name  D1009.1d.1
Length (nt)  1578   Chromosome Location  X: 8936638-8938918
Chromosome . Primary Identifier  X Chromosome Location . Start  8936638
Chromosome Location . End  8938918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1009.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017012 acs-22 D1009.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1009.1d D1009.1d 1578   X: 8936638-8936821

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1d.1 8936638 8938918 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243134   184   X: 8936638-8936821 Caenorhabditis elegans
Exon243137   457   X: 8936904-8937360 Caenorhabditis elegans
Exon243140   164   X: 8937405-8937568 Caenorhabditis elegans
Exon243143   446   X: 8937956-8938401 Caenorhabditis elegans
Exon243146   66   X: 8938488-8938553 Caenorhabditis elegans
Exon243149   97   X: 8938608-8938704 Caenorhabditis elegans
Exon243150   164   X: 8938755-8938918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1009.1d.1 8936638 8938918 1

1 Sequence

Length
1578

1 Sequence Ontology Term

Identifier Name Description
transcript