WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1073.1.1 Sequence Name  D1073.1.1
Length (nt)  2529   Chromosome Location  X: 8941395-8950978
Chromosome . Primary Identifier  X Chromosome Location . Start  8941395
Chromosome Location . End  8950978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1073.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017039 trk-1 D1073.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1073.1 D1073.1 2529   X: 8941395-8941819

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1073.1.1 8941395 8950978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243159   425   X: 8941395-8941819 Caenorhabditis elegans
Exon243160   95   X: 8942403-8942497 Caenorhabditis elegans
Exon243161   140   X: 8942641-8942780 Caenorhabditis elegans
Exon243162   135   X: 8942830-8942964 Caenorhabditis elegans
Exon243163   104   X: 8943041-8943144 Caenorhabditis elegans
Exon243164   103   X: 8943845-8943947 Caenorhabditis elegans
Exon243167   102   X: 8944485-8944586 Caenorhabditis elegans
Exon243168   92   X: 8944635-8944726 Caenorhabditis elegans
Exon243169   91   X: 8944780-8944870 Caenorhabditis elegans
Exon243170   153   X: 8944921-8945073 Caenorhabditis elegans
Exon243173   145   X: 8945558-8945702 Caenorhabditis elegans
Exon243174   89   X: 8945748-8945836 Caenorhabditis elegans
Exon243175   114   X: 8946645-8946758 Caenorhabditis elegans
Exon243176   163   X: 8947794-8947956 Caenorhabditis elegans
Exon243177   578   X: 8950401-8950978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1073.1.1 8941395 8950978 -1

1 Sequence

Length
2529

1 Sequence Ontology Term

Identifier Name Description
transcript