WormMine: Gene WBGene00196511

• WormBase Gene ID: WBGene00196511
• Gene Name: C48C5.5
• Sequence Name: C48C5.5
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in neurons based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 342

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00196511

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C48C5.5	C48C5.5	342	X: 8952130-8952471

Other

0 CDSs

0 RNAi Result

9 Allele

• gk964260
• gk962707
• gk963732
• gk964126
• gk856096
• gk790472
• gk676079
• gk961371
• gk964112

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00196511
• Start: 8952130
• End: 8952471
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_8950979..8952129
• Length (nt): 1151
• Chromosome Location: X: 8950979-8952129
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00196511
• Start: 8952130
• End: 8952471
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 342

1 Sequence Ontology Term