WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B6.7.1 Sequence Name  T25B6.7.1
Length (nt)  3117   Chromosome Location  X: 9029470-9033955
Chromosome . Primary Identifier  X Chromosome Location . Start  9029470
Chromosome Location . End  9033955 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004911 snf-12 T25B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B6.7 T25B6.7 3069   X: 9029478-9029810

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B6.7.1 9029470 9033955 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243316   341   X: 9029470-9029810 Caenorhabditis elegans
Exon243317   379   X: 9030167-9030545 Caenorhabditis elegans
Exon243318   144   X: 9030593-9030736 Caenorhabditis elegans
Exon243319   94   X: 9030788-9030881 Caenorhabditis elegans
Exon243320   172   X: 9030994-9031165 Caenorhabditis elegans
Exon243321   227   X: 9031209-9031435 Caenorhabditis elegans
Exon243322   95   X: 9031486-9031580 Caenorhabditis elegans
Exon243323   130   X: 9031628-9031757 Caenorhabditis elegans
Exon243324   124   X: 9031804-9031927 Caenorhabditis elegans
Exon243325   180   X: 9031973-9032152 Caenorhabditis elegans
Exon243326   786   X: 9032245-9033030 Caenorhabditis elegans
Exon243327   445   X: 9033511-9033955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B6.7.1 9029470 9033955 1

1 Sequence

Length
3117

1 Sequence Ontology Term

Identifier Name Description
transcript