WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47E1.3.1 Sequence Name  F47E1.3.1
Length (nt)  612   Chromosome Location  X: 9046213-9047448
Chromosome . Primary Identifier  X Chromosome Location . Start  9046213
Chromosome Location . End  9047448 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47E1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018567 prdm-14 F47E1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47E1.3 F47E1.3 612   X: 9046213-9046270

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47E1.3.1 9046213 9047448 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243346   58   X: 9046213-9046270 Caenorhabditis elegans
Exon243347   104   X: 9046317-9046420 Caenorhabditis elegans
Exon243348   72   X: 9046467-9046538 Caenorhabditis elegans
Exon243349   78   X: 9046692-9046769 Caenorhabditis elegans
Exon243350   177   X: 9046824-9047000 Caenorhabditis elegans
Exon243351   69   X: 9047277-9047345 Caenorhabditis elegans
Exon243352   54   X: 9047395-9047448 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47E1.3.1 9046213 9047448 1

1 Sequence

Length
612

1 Sequence Ontology Term

Identifier Name Description
transcript