WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4c.1 Sequence Name  C25A11.4c.1
Length (nt)  5141   Chromosome Location  X: 9082946-9111079
Chromosome . Primary Identifier  X Chromosome Location . Start  9082946
Chromosome Location . End  9111079 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4c C25A11.4c 4722   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4c.1 9082946 9111079 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243425   139   X: 9082946-9083084 Caenorhabditis elegans
Exon243431   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243440   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243445   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243451   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243458   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243476   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243486   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243500   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243512   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243526   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243539   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243553   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243568   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243583   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243599   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243615   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243630   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243646   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243661   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243675   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243700   818   X: 9110262-9111079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4c.1 9082946 9111079 1

1 Sequence

Length
5141

1 Sequence Ontology Term

Identifier Name Description
transcript