WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.1 Sequence Name  C25A11.4a.1
Length (nt)  6044   Chromosome Location  X: 9082946-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9082946
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243403   139   X: 9082946-9083084 Caenorhabditis elegans
Exon243407   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243416   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243421   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243427   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243433   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243450   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243460   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243473   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243485   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243499   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243512   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243526   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243541   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243556   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243572   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243588   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243604   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243620   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243635   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243649   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243664   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243679   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243693   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243707   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243721   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243735   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243749   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243772   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

1 Sequence

Length
6044

1 Sequence Ontology Term

Identifier Name Description
transcript