WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4b.1 Sequence Name  C25A11.4b.1
Length (nt)  5046   Chromosome Location  X: 9082983-9108549
Chromosome . Primary Identifier  X Chromosome Location . Start  9082983
Chromosome Location . End  9108549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4b C25A11.4b 3882   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4b.1 9082983 9108549 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243405   102   X: 9082983-9083084 Caenorhabditis elegans
Exon243408   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243417   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243422   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243428   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243435   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243453   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243463   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243477   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243489   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243503   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243516   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243530   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243545   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243560   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243576   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243592   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243619   1246   X: 9107304-9108549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4b.1 9082983 9108549 1

1 Sequence

Length
5046

1 Sequence Ontology Term

Identifier Name Description
transcript