WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4f.1 Sequence Name  C25A11.4f.1
Length (nt)  5718   Chromosome Location  X: 9082983-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9082983
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4f C25A11.4f 5718   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243428   102   X: 9082983-9083084 Caenorhabditis elegans
Exon243433   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243442   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243447   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243453   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243460   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243478   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243488   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243502   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243514   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243528   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243541   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243555   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243570   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243585   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243602   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243618   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243633   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243649   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243663   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243678   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243692   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243707   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243721   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243735   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243749   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243763   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243777   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243786   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

1 Sequence

Length
5718

1 Sequence Ontology Term

Identifier Name Description
transcript