WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4f.1 Sequence Name  C25A11.4f.1
Length (nt)  5718   Chromosome Location  X: 9082983-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9082983
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4f C25A11.4f 5718   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243406   102   X: 9082983-9083084 Caenorhabditis elegans
Exon243411   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243420   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243425   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243431   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243438   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243456   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243466   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243480   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243492   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243506   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243519   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243533   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243548   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243563   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243580   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243596   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243611   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243627   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243641   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243656   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243670   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243685   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243699   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243713   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243727   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243741   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243755   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243764   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

1 Sequence

Length
5718

1 Sequence Ontology Term

Identifier Name Description
transcript