WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.2 Sequence Name  C25A11.4a.2
Length (nt)  5558   Chromosome Location  X: 9090097-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9090097
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243426   166   X: 9090097-9090262 Caenorhabditis elegans
Exon243434   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243451   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243461   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243474   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243486   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243500   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243513   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243527   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243542   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243557   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243573   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243589   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243605   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243621   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243636   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243650   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243665   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243680   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243694   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243708   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243722   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243736   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243750   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243773   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

1 Sequence

Length
5558

1 Sequence Ontology Term

Identifier Name Description
transcript