WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.3 Sequence Name  C25A11.4a.3
Length (nt)  5394   Chromosome Location  X: 9090347-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9090347
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4a.3 9090347 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243432   170   X: 9090347-9090516 Caenorhabditis elegans
Exon243452   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243462   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243475   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243487   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243501   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243514   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243528   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243543   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243558   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243574   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243590   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243606   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243622   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243637   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243651   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243666   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243681   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243695   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243709   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243723   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243737   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243751   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243774   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4a.3 9090347 9113613 1

1 Sequence

Length
5394

1 Sequence Ontology Term

Identifier Name Description
transcript