WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4l.1 Sequence Name  C25A11.4l.1
Length (nt)  4710   Chromosome Location  X: 9094746-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9094746
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4l C25A11.4l 4710   X: 9094746-9094808

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4l.1 9094746 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243459   63   X: 9094746-9094808 Caenorhabditis elegans
Exon243468   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243482   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243495   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243509   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243523   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243538   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243554   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243569   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243586   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243602   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243617   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243633   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243647   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243662   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243676   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243691   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243705   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243719   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243733   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243747   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243761   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243770   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4l.1 9094746 9113324 1

1 Sequence

Length
4710

1 Sequence Ontology Term

Identifier Name Description
transcript