WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.4 Sequence Name  C25A11.4a.4
Length (nt)  5013   Chromosome Location  X: 9097105-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9097105
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.4 9097105 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243472   148   X: 9097105-9097252 Caenorhabditis elegans
Exon243476   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243488   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243502   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243515   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243529   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243544   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243559   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243575   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243591   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243607   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243623   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243638   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243652   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243667   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243682   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243696   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243710   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243724   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243738   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243752   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243775   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.4 9097105 9113613 1

1 Sequence

Length
5013

1 Sequence Ontology Term

Identifier Name Description
transcript