WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51F10.2a.1 Sequence Name  Y51F10.2a.1
Length (nt)  1073   Chromosome Location  I: 1978030-1983412
Chromosome . Primary Identifier  I Chromosome Location . Start  1978030
Chromosome Location . End  1983412 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51F10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021763 grif-1 Y51F10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51F10.2a Y51F10.2a 918   I: 1978052-1978130

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51F10.2a.1 1978030 1983412 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3409   101   I: 1978030-1978130 Caenorhabditis elegans
Exon3410   149   I: 1978520-1978668 Caenorhabditis elegans
Exon3411   140   I: 1979459-1979598 Caenorhabditis elegans
Exon3415   451   I: 1981366-1981816 Caenorhabditis elegans
Exon3420   232   I: 1983181-1983412 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51F10.2a.1 1978030 1983412 1

1 Sequence

Length
1073

1 Sequence Ontology Term

Identifier Name Description
transcript