WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0563.6c.1 Sequence Name  B0563.6c.1
Length (nt)  1386   Chromosome Location  X: 9138060-9145715
Chromosome . Primary Identifier  X Chromosome Location . Start  9138060
Chromosome Location . End  9145715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0563.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015263 B0563.6 B0563.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0563.6c B0563.6c 1266   X: 9138060-9138082

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0563.6c.1 9138060 9145715 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243809   23   X: 9138060-9138082 Caenorhabditis elegans
Exon243814   89   X: 9140443-9140531 Caenorhabditis elegans
Exon243820   485   X: 9142200-9142684 Caenorhabditis elegans
Exon243824   150   X: 9142735-9142884 Caenorhabditis elegans
Exon243828   93   X: 9142929-9143021 Caenorhabditis elegans
Exon243832   270   X: 9143114-9143383 Caenorhabditis elegans
Exon243833   140   X: 9144076-9144215 Caenorhabditis elegans
Exon243837   136   X: 9145580-9145715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0563.6c.1 9138060 9145715 1

1 Sequence

Length
1386

1 Sequence Ontology Term

Identifier Name Description
transcript