WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35B8.2b.1 Sequence Name  C35B8.2b.1
Length (nt)  3681   Chromosome Location  X: 9216868-9232137
Chromosome . Primary Identifier  X Chromosome Location . Start  9216868
Chromosome Location . End  9232137 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35B8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006887 vav-1 C35B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35B8.2b C35B8.2b 3024   X: 9217459-9217551

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C35B8.2b.1 9216868 9232137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243946   684   X: 9216868-9217551 Caenorhabditis elegans
Exon243948   144   X: 9217598-9217741 Caenorhabditis elegans
Exon243951   90   X: 9218271-9218360 Caenorhabditis elegans
Exon243954   91   X: 9218456-9218546 Caenorhabditis elegans
Exon243957   249   X: 9218590-9218838 Caenorhabditis elegans
Exon243960   110   X: 9219137-9219246 Caenorhabditis elegans
Exon243963   188   X: 9220107-9220294 Caenorhabditis elegans
Exon243966   120   X: 9220344-9220463 Caenorhabditis elegans
Exon243969   149   X: 9221037-9221185 Caenorhabditis elegans
Exon243972   578   X: 9221232-9221809 Caenorhabditis elegans
Exon243975   205   X: 9221908-9222112 Caenorhabditis elegans
Exon243978   311   X: 9222422-9222732 Caenorhabditis elegans
Exon243981   82   X: 9223219-9223300 Caenorhabditis elegans
Exon243984   141   X: 9223368-9223508 Caenorhabditis elegans
Exon243988   176   X: 9223640-9223815 Caenorhabditis elegans
Exon243991   91   X: 9223869-9223959 Caenorhabditis elegans
Exon243994   116   X: 9224209-9224324 Caenorhabditis elegans
Exon243998   156   X: 9231982-9232137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C35B8.2b.1 9216868 9232137 -1

1 Sequence

Length
3681

1 Sequence Ontology Term

Identifier Name Description
transcript