WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18G5.4.1 Sequence Name  F18G5.4.1
Length (nt)  2278   Chromosome Location  X: 9235103-9242223
Chromosome . Primary Identifier  X Chromosome Location . Start  9235103
Chromosome Location . End  9242223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18G5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017580 lgc-4 F18G5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18G5.4 F18G5.4 1908   X: 9235150-9235326

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.4.1 9235103 9242223 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244001   224   X: 9235103-9235326 Caenorhabditis elegans
Exon244003   117   X: 9235946-9236062 Caenorhabditis elegans
Exon244004   123   X: 9236111-9236233 Caenorhabditis elegans
Exon244005   132   X: 9236278-9236409 Caenorhabditis elegans
Exon244006   206   X: 9236562-9236767 Caenorhabditis elegans
Exon244007   169   X: 9236967-9237135 Caenorhabditis elegans
Exon244008   234   X: 9237307-9237540 Caenorhabditis elegans
Exon244009   139   X: 9237585-9237723 Caenorhabditis elegans
Exon244013   155   X: 9239949-9240103 Caenorhabditis elegans
Exon244014   146   X: 9240420-9240565 Caenorhabditis elegans
Exon244015   143   X: 9241280-9241422 Caenorhabditis elegans
Exon244016   490   X: 9241734-9242223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.4.1 9235103 9242223 -1

1 Sequence

Length
2278

1 Sequence Ontology Term

Identifier Name Description
transcript